The State of Single-Cell Atlas Data Visualization
Number of papers: 45
Number of subfigures: 1,846
Number of codes: 85
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anatomical diagram
area plot
bar plot
beeswarm plot
box plot
cell cycle
cell type composition
chromatin accessibility
clustermap
comparison
confusion matrix
contact matrix
cross-organ
cross-species
custom annotations
custom coloring
data integration
deconvolution
dendrogram
density plot
developmental
diagram
dimensionality reduction
donut plot
dot plot
epigenomics
evolution
experimental design
filtering
FISH-like
gating scatterplot
gel
genetics
genomic
gsea
heatmap
hexbin
highlighting
histology
imaging
immune repertoire
jitter plot
kaplan-meier
ligand-receptor
ligand-receptor circle plot
line plot
logo plot
lollipop chart
model performance
multi-omics
multi-scale
multiplex
network
non-standard metric
non-standard plot type
parallel coordinates
pie chart
pie chart visium
ppi network
proteomics
pseudoaxis
pseudotime
radial plot
rainfall plot
representative sample
sankey plot
scatterplot
signature score
small multiples
spatial
spatial transcriptomics
spatial validation
spatial-3d
stacked bar plot
statistical significance
subclustering
subsubfigures
ternary plot
upset plot
velocity
venn diagram
violin plot matrix
violin plots
visium
volcano plot
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